Note: Most of the research code here is written in C /CUDA, however there will be the ocassional Matlab/Octave file and Python script.I have provided a tutorial for those unfamiliar with the build process.This software is routinely used on files exceeding 1TB in size.
Visualization will require a programmable GPU that supports GLSL.
The volume ray-tracing code is hidden, allowing the user to focus on a shading function that returns a single color and opacity based on texture values and light positions.
The user can load multiple volumes (as image sequences and RAW data) and test multiple shaders simultaneously.[website] This software simulates the interaction of light across multiple wavelengths as it passes through a spherical particle.
This work is based on our BMC Bioinformatics 2012 publication.
Select a ground-truth and segmentation file and drag them both over the executable.